Really, the logic lovers of Detective Conan (1994) just need to keep out of Magic Kaito (1987) if they can’t enjoy it for what it is. Don’t erase any canon character, but especially ones that existed before your precious totally-not-miraculously poisoned detective.
Akako is a good, precious, and, yes, magical character, and it’d be great if you could leave her the frick alone when she’s not even in your logic series.